scripts/functions: Fix CT_ExtractGit function.

Change CT_ExtractGit so that it clones the repository, instead of just
symlinking it. After cloning, any given ref is checked out, or if no
ref is given, the HEAD of the repository is checked out.

This makes CT_Extract behave similar for git repositories as it does
for tarballs, so that it for example can be used for passing glibc-ports
as a git repository.

Signed-off-by: "Esben Haabendal" <esben.haabendal@prevas.dk>
[yann.morin.1998@anciens.enib.fr: fix incomplete var rename]
Signed-off-by: "Yann E. MORIN" <yann.morin.1998@anciens.enib.fr>

 # Bare metal config options

 ## select BARE_METAL

 ##

 ## help 'Bare metal' refers to those programs that run without any kernel.

 ## help

 ## help You probably want to say 'y' here if you plan to use your compiler

 ## help to build bootloaders. It is not yet suitable to build Linux kernels,

 ## help though, because the APCI stuff relies on the target C library headers

 ## help being available?!?!...