scripts: create CT_HEADERS_DIR

"${CT_SYSROOT_DIR}/usr/include" is only for "${CT_USE_SYSROOT}" = "y".
We should also mkdir when "${CT_USE_SYSROOT}" != "y".
"${CT_HEADERS_DIR}" can support both cases.

Signed-off-by: Zhenqiang Chen <zhenqiang.chen@linaro.org>

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