config: move the patch choice to the extract section

Choosing the origin of the patches to apply is best
done in the 'extract' section.

config: add fallback to patch order

Add the possibility to fallback to either bundled or local patches
if local or bundled are missing.

config: add the local,bundled patch order

This ordering first applies the local patches, then the bundeld ones.

config: make selecting the patch origin a choice rather than a bool

functions: do not over-detect error when patching

Merge.

tools wrapper: fix error due to unused argument

In the C wrapper, the argc argument is not used, causing an error
(as we treat warnings as errors). Use a dummy allocation to get
rid of the warning.